trim the bioch
All IQ airboxes fit like chit right out of the box. the 05-07's had a airbox boot that stuck in the airbox.
For For the 05-07, trim about a pen's width of the very bottom of the carb opening, radius your cut to end on the side of the carb hole. Lube your boots with a small smear of SilGlyde (brake lube paste) or KY and stick your hand down the airbox hole as stated above. the boots should slide onto the carbs easily now and be careful not to push the seal lip into the airbox.
For the 08RR and 08-09IQr, the carb boots stick on the carbs, and the airbox slides over them. It is WAAAY easier to get these on and I have noticed on my 09 that the holes were opened up just a hair to ease the install. Hand down the box again and you can feel if your boots are seated squarely in the airbox holes.
The last thing is Practice till perfect. The first IQr airbox install I did took half a day of skinned knuckles and hurt pride to get right. now it is less than a minute. For the guy running the 08 carbs on the 05 box, What boots are you using?
Good luck, Craig